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LOC125665821 dnaJ homolog subfamily B member 6-like [ Ostrea edulis ]

Gene ID: 125665821, updated on 16-Nov-2023

Summary

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Gene symbol
LOC125665821
Gene description
dnaJ homolog subfamily B member 6-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrea edulis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea
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Genomic context

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See LOC125665821 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_05 current xbOstEdul1.1 (GCF_947568905.1) 10 NC_079173.1 (32811930..32845768, complement)
100 previous assembly OEROSLIN_1.1 (GCF_023158985.2) Unplaced Scaffold NW_026038639.1 (29084524..29117163, complement)

Chromosome 10 - NC_079173.1Genomic Context describing neighboring genes Neighboring gene vacuolar-sorting protein SNF8-like Neighboring gene uncharacterized LOC125665820 Neighboring gene polyribonucleotide 5'-hydroxyl-kinase Clp1-like Neighboring gene uncharacterized LOC125665814 Neighboring gene uncharacterized LOC125665827 Neighboring gene uncharacterized LOC130050730

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947568905.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbOstEdul1.1

Genomic

  1. NC_079173.1 Reference xbOstEdul1.1

    Range
    32811930..32845768 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056151032.1 → XP_056007007.1  dnaJ homolog subfamily B member 6-like isoform X5

  2. XM_048898713.2 → XP_048754670.2  dnaJ homolog subfamily B member 6-like isoform X1

  3. XM_056151034.1 → XP_056007009.1  dnaJ homolog subfamily B member 6-like isoform X6

  4. XM_056151019.1 → XP_056006994.1  dnaJ homolog subfamily B member 6-like isoform X4

  5. XM_056151016.1 → XP_056006991.1  dnaJ homolog subfamily B member 6-like isoform X3

  6. XM_056151009.1 → XP_056006984.1  dnaJ homolog subfamily B member 6-like isoform X2

  7. XM_048898718.2 → XP_048754675.2  dnaJ homolog subfamily B member 6-like isoform X4

  8. XM_048898717.2 → XP_048754674.2  dnaJ homolog subfamily B member 6-like isoform X3

  9. XM_048898710.2 → XP_048754667.2  dnaJ homolog subfamily B member 6-like isoform X1

  10. XM_048898721.2 → XP_048754678.2  dnaJ homolog subfamily B member 6-like isoform X6

  11. XM_048898719.2 → XP_048754676.2  dnaJ homolog subfamily B member 6-like isoform X5

  12. XM_048898716.2 → XP_048754673.2  dnaJ homolog subfamily B member 6-like isoform X2

  13. XM_048898714.2 → XP_048754671.2  dnaJ homolog subfamily B member 6-like isoform X1

  14. XM_056151024.1 → XP_056006999.1  dnaJ homolog subfamily B member 6-like isoform X4

  15. XM_056151033.1 → XP_056007008.1  dnaJ homolog subfamily B member 6-like isoform X6

  16. XM_056151030.1 → XP_056007005.1  dnaJ homolog subfamily B member 6-like isoform X5

  17. XM_056151003.1 → XP_056006978.1  dnaJ homolog subfamily B member 6-like isoform X1

  18. XM_056151023.1 → XP_056006998.1  dnaJ homolog subfamily B member 6-like isoform X4

  19. XM_056151017.1 → XP_056006992.1  dnaJ homolog subfamily B member 6-like isoform X3

  20. XM_056151027.1 → XP_056007002.1  dnaJ homolog subfamily B member 6-like isoform X5

  21. XM_056151010.1 → XP_056006985.1  dnaJ homolog subfamily B member 6-like isoform X2

  22. XM_048898712.2 → XP_048754669.2  dnaJ homolog subfamily B member 6-like isoform X1

  23. XM_056151022.1 → XP_056006997.1  dnaJ homolog subfamily B member 6-like isoform X4

  24. XM_056151013.1 → XP_056006988.1  dnaJ homolog subfamily B member 6-like isoform X2

  25. XM_056151026.1 → XP_056007001.1  dnaJ homolog subfamily B member 6-like isoform X5

  26. XM_056151008.1 → XP_056006983.1  dnaJ homolog subfamily B member 6-like isoform X2

  27. XM_048898711.2 → XP_048754668.2  dnaJ homolog subfamily B member 6-like isoform X1

  28. XM_056151021.1 → XP_056006996.1  dnaJ homolog subfamily B member 6-like isoform X4

  29. XM_056151015.1 → XP_056006990.1  dnaJ homolog subfamily B member 6-like isoform X3

  30. XM_056151005.1 → XP_056006980.1  dnaJ homolog subfamily B member 6-like isoform X1

  31. XM_056151006.1 → XP_056006981.1  dnaJ homolog subfamily B member 6-like isoform X1

  32. XM_056151007.1 → XP_056006982.1  dnaJ homolog subfamily B member 6-like isoform X1

  33. XM_056151011.1 → XP_056006986.1  dnaJ homolog subfamily B member 6-like isoform X2

  34. XM_056151028.1 → XP_056007003.1  dnaJ homolog subfamily B member 6-like isoform X5

  35. XM_056151035.1 → XP_056007010.1  dnaJ homolog subfamily B member 6-like isoform X6

  36. XM_056151020.1 → XP_056006995.1  dnaJ homolog subfamily B member 6-like isoform X4

  37. XM_056151014.1 → XP_056006989.1  dnaJ homolog subfamily B member 6-like isoform X3

  38. XM_048898715.2 → XP_048754672.2  dnaJ homolog subfamily B member 6-like isoform X1

  39. XM_056151031.1 → XP_056007006.1  dnaJ homolog subfamily B member 6-like isoform X5

  40. XM_056151012.1 → XP_056006987.1  dnaJ homolog subfamily B member 6-like isoform X2

  41. XM_056151025.1 → XP_056007000.1  dnaJ homolog subfamily B member 6-like isoform X4

  42. XM_056151029.1 → XP_056007004.1  dnaJ homolog subfamily B member 6-like isoform X5

  43. XM_056151004.1 → XP_056006979.1  dnaJ homolog subfamily B member 6-like isoform X1

Nucleotide Protein
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