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LOC125664252 toll-like receptor 2 type-1 [ Ostrea edulis ]

Gene ID: 125664252, updated on 16-Nov-2023

Summary

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Gene symbol
LOC125664252
Gene description
toll-like receptor 2 type-1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrea edulis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea
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Genomic context

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See LOC125664252 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_05 current xbOstEdul1.1 (GCF_947568905.1) 1 NC_079164.1 (7634884..7638797, complement)
100 previous assembly OEROSLIN_1.1 (GCF_023158985.2) Unplaced Scaffold NW_026038638.1 (110060394..110080670)

Chromosome 1 - NC_079164.1Genomic Context describing neighboring genes Neighboring gene cyclic AMP-dependent transcription factor ATF-6 alpha-like Neighboring gene uncharacterized LOC130051178 Neighboring gene solute carrier family 22 member 4-like Neighboring gene solute carrier family 22 member 4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll-like receptor 2 type-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947568905.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbOstEdul1.1

Genomic

  1. NC_079164.1 Reference xbOstEdul1.1

    Range
    7634884..7638797 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056152557.1 → XP_056008532.1  toll-like receptor 2 type-1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases