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LOC125662698 solute carrier family 2, facilitated glucose transporter member 1-like [ Ostrea edulis ]

Gene ID: 125662698, updated on 16-Nov-2023

Summary

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Gene symbol
LOC125662698
Gene description
solute carrier family 2, facilitated glucose transporter member 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrea edulis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea
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Genomic context

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See LOC125662698 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_05 current xbOstEdul1.1 (GCF_947568905.1) 1 NC_079164.1 (17861996..17900852, complement)
100 previous assembly OEROSLIN_1.1 (GCF_023158985.2) Unplaced Scaffold NW_026038638.1 (91290925..91329588, complement)

Chromosome 1 - NC_079164.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette sub-family F member 3-like Neighboring gene uncharacterized LOC130051259 Neighboring gene uncharacterized LOC130051258 Neighboring gene arylsulfatase B-like Neighboring gene uncharacterized LOC125662722 Neighboring gene uncharacterized LOC130051261

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexose transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monosaccharide transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 2, facilitated glucose transporter member 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947568905.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbOstEdul1.1

Genomic

  1. NC_079164.1 Reference xbOstEdul1.1

    Range
    17861996..17900852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048895018.2 → XP_048750975.2  solute carrier family 2, facilitated glucose transporter member 1-like isoform X1

  2. XM_048895026.2 → XP_048750983.2  solute carrier family 2, facilitated glucose transporter member 1-like isoform X1

  3. XM_056152933.1 → XP_056008908.1  solute carrier family 2, facilitated glucose transporter member 1-like isoform X3

  4. XM_048895032.2 → XP_048750989.2  solute carrier family 2, facilitated glucose transporter member 1-like isoform X2

Nucleotide Protein
Heading Accession and Version

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