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LOC125657098 protein O-glucosyltransferase 1-like [ Ostrea edulis ]

Gene ID: 125657098, updated on 16-Nov-2023

Summary

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Gene symbol
LOC125657098
Gene description
protein O-glucosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrea edulis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea
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Genomic context

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See LOC125657098 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_05 current xbOstEdul1.1 (GCF_947568905.1) 7 NC_079170.1 (12281286..12353963, complement)
100 previous assembly OEROSLIN_1.1 (GCF_023158985.2) Unplaced Scaffold NW_026039668.1 (75339270..75376045)

Chromosome 7 - NC_079170.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125656051 Neighboring gene WASH complex subunit 1-like Neighboring gene uncharacterized LOC125657101 Neighboring gene uncharacterized LOC125657097 Neighboring gene uncharacterized LOC125666483 Neighboring gene uncharacterized LOC130047814 Neighboring gene transfer RNA phenylalanine (anticodon AAA) Neighboring gene transfer RNA serine (anticodon AGA)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: protein O-glucosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947568905.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbOstEdul1.1

Genomic

  1. NC_079170.1 Reference xbOstEdul1.1

    Range
    12281286..12353963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048887745.2 → XP_048743702.2  LOW QUALITY PROTEIN: protein O-glucosyltransferase 1-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases