U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC125654020 ribitol-5-phosphate xylosyltransferase 1-like [ Ostrea edulis ]

Gene ID: 125654020, updated on 16-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC125654020
Gene description
ribitol-5-phosphate xylosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrea edulis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC125654020 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_05 current xbOstEdul1.1 (GCF_947568905.1) 7 NC_079170.1 (38728534..38749812)
100 previous assembly OEROSLIN_1.1 (GCF_023158985.2) Unplaced Scaffold NW_026039668.1 (47750520..47770289, complement)

Chromosome 7 - NC_079170.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125654021 Neighboring gene tRNA (guanine(6)-N2)-methyltransferase THUMP3-like Neighboring gene tRNA methyltransferase 10 homolog B-like Neighboring gene thioredoxin-like protein 4B

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribitol beta-1,4-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ribitol-5-phosphate xylosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_947568905.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbOstEdul1.1

Genomic

  1. NC_079170.1 Reference xbOstEdul1.1

    Range
    38728534..38749812
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048883763.2 → XP_048739720.2  ribitol-5-phosphate xylosyltransferase 1-like

RNA

  1. XR_008796942.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases