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LOC125650172 ceramide glucosyltransferase-like [ Ostrea edulis ]

Gene ID: 125650172, updated on 16-Nov-2023

Summary

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Gene symbol
LOC125650172
Gene description
ceramide glucosyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrea edulis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea
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Genomic context

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See LOC125650172 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_05 current xbOstEdul1.1 (GCF_947568905.1) 5 NC_079168.1 (90920944..90964959, complement)
100 previous assembly OEROSLIN_1.1 (GCF_023158985.2) Unplaced Scaffold NW_026039557.1 (3317090..3367030)

Chromosome 5 - NC_079168.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130046681 Neighboring gene uncharacterized LOC130046682 Neighboring gene uncharacterized LOC125650583 Neighboring gene uncharacterized LOC125650593 Neighboring gene thyroid receptor-interacting protein 11-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide glucosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947568905.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbOstEdul1.1

Genomic

  1. NC_079168.1 Reference xbOstEdul1.1

    Range
    90920944..90964959 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048878202.2 → XP_048734159.2  ceramide glucosyltransferase-like isoform X2

  2. XM_048878199.2 → XP_048734156.2  ceramide glucosyltransferase-like isoform X1

  3. XM_048878200.2 → XP_048734157.2  ceramide glucosyltransferase-like isoform X1

  4. XM_048878201.2 → XP_048734158.2  ceramide glucosyltransferase-like isoform X1

  5. XM_056139259.1 → XP_055995234.1  ceramide glucosyltransferase-like isoform X2

Nucleotide Protein
Heading Accession and Version

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