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LOC125649527 polypeptide N-acetylgalactosaminyltransferase 1-like [ Ostrea edulis ]

Gene ID: 125649527, updated on 16-Nov-2023

Summary

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Gene symbol
LOC125649527
Gene description
polypeptide N-acetylgalactosaminyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrea edulis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea
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Genomic context

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See LOC125649527 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_05 current xbOstEdul1.1 (GCF_947568905.1) 5 NC_079168.1 (26039303..26092529)
100 previous assembly OEROSLIN_1.1 (GCF_023158985.2) Unplaced Scaffold NW_026039557.1 (66041718..66078763, complement)

Chromosome 5 - NC_079168.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130054780 Neighboring gene neuronal acetylcholine receptor subunit alpha-10-like Neighboring gene polypeptide N-acetylgalactosaminyltransferase 13-like Neighboring gene heme-binding protein 2-like Neighboring gene methylmalonyl-CoA epimerase, mitochondrial Neighboring gene mitochondrial import inner membrane translocase subunit TIM44-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947568905.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbOstEdul1.1

Genomic

  1. NC_079168.1 Reference xbOstEdul1.1

    Range
    26039303..26092529
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048877101.2 → XP_048733058.2  polypeptide N-acetylgalactosaminyltransferase 1-like

Nucleotide Protein
Heading Accession and Version

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