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LTC4S leukotriene C4 synthase [ Caretta caretta (Loggerhead turtle) ]

Gene ID: 125641150, updated on 22-Mar-2024

Summary

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Gene symbol
LTC4S
Gene description
leukotriene C4 synthase
See related
EnsemblRapid:ENSCECG00000017522
Gene type
protein coding
RefSeq status
MODEL
Organism
Caretta caretta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Caretta
Orthologs
human mouse all
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Genomic context

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See LTC4S in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
100 current GSC_CCare_1.0 (GCF_023653815.1) 8 NC_064480.1 (7774449..7787682, complement)

Chromosome 8 - NC_064480.1Genomic Context describing neighboring genes Neighboring gene MRN complex interacting protein Neighboring gene sequestosome 1 Neighboring gene alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B Neighboring gene mastermind like transcriptional coactivator 1 Neighboring gene calnexin Neighboring gene leukotriene C4 synthase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064480.1 Chromosome 8 Reference GSC_CCare_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enzyme activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutathione peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutathione transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables leukotriene-C4 synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in leukotriene biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leukotriene C4 synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Caretta caretta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_CCare_1.0 Primary Assembly

Genomic

  1. NC_064480.1 Reference GSC_CCare_1.0 Primary Assembly

    Range
    7774449..7787682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048860655.1 → XP_048716612.1  leukotriene C4 synthase

    Related
    ENSCECP00000026341.1, ENSCECT00000030762.1
Nucleotide Protein
Heading Accession and Version

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