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CHAT choline O-acetyltransferase [ Caretta caretta (Loggerhead turtle) ]

Gene ID: 125639820, updated on 22-Mar-2024

Summary

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Gene symbol
CHAT
Gene description
choline O-acetyltransferase
See related
EnsemblRapid:ENSCECG00000016141
Gene type
protein coding
RefSeq status
MODEL
Organism
Caretta caretta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Caretta
Orthologs
human mouse all
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Genomic context

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See CHAT in Genome Data Viewer
Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
100 current GSC_CCare_1.0 (GCF_023653815.1) 7 NC_064479.1 (71488863..71539710)

Chromosome 7 - NC_064479.1Genomic Context describing neighboring genes Neighboring gene retinal G protein coupled receptor Neighboring gene uncharacterized LOC125639823 Neighboring gene solute carrier family 18 member A3 Neighboring gene chromosome 7 C10orf53 homolog Neighboring gene oxoglutarate dehydrogenase L

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064479.1 Chromosome 7 Reference GSC_CCare_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline O-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline O-acetyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Caretta caretta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_CCare_1.0 Primary Assembly

Genomic

  1. NC_064479.1 Reference GSC_CCare_1.0 Primary Assembly

    Range
    71488863..71539710
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048857542.1 → XP_048713499.1  choline O-acetyltransferase isoform X1

    Related
    ENSCECP00000023972.1, ENSCECT00000028219.1

  2. XM_048857543.1 → XP_048713500.1  choline O-acetyltransferase isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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