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SGPP1 sphingosine-1-phosphate phosphatase 1 [ Caretta caretta (Loggerhead turtle) ]

Gene ID: 125638565, updated on 22-Mar-2024

Summary

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Gene symbol
SGPP1
Gene description
sphingosine-1-phosphate phosphatase 1
See related
EnsemblRapid:ENSCECG00000016508
Gene type
protein coding
RefSeq status
MODEL
Organism
Caretta caretta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Caretta
Orthologs
human mouse all
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Genomic context

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See SGPP1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
100 current GSC_CCare_1.0 (GCF_023653815.1) 6 NC_064478.1 (112052740..112096743)

Chromosome 6 - NC_064478.1Genomic Context describing neighboring genes Neighboring gene estrogen receptor 2 Neighboring gene spectrin repeat containing nuclear envelope protein 2 Neighboring gene WD repeat domain 89 Neighboring gene translation initiation factor IF-2-like Neighboring gene protein phosphatase 2 regulatory subunit B'epsilon Neighboring gene glycoprotein hormone subunit beta 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064478.1 Chromosome 6 Reference GSC_CCare_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingosine-1-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine-1-phosphate phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Caretta caretta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_CCare_1.0 Primary Assembly

Genomic

  1. NC_064478.1 Reference GSC_CCare_1.0 Primary Assembly

    Range
    112052740..112096743
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048854494.1 → XP_048710451.1  sphingosine-1-phosphate phosphatase 1

    Related
    ENSCECP00000024612.1, ENSCECT00000028883.1
Nucleotide Protein
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