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ACSL1 acyl-CoA synthetase long chain family member 1 [ Caretta caretta (Loggerhead turtle) ]

Gene ID: 125635799, updated on 22-Mar-2024

Summary

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Gene symbol
ACSL1
Gene description
acyl-CoA synthetase long chain family member 1
See related
EnsemblRapid:ENSCECG00000014106
Gene type
protein coding
RefSeq status
MODEL
Organism
Caretta caretta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Caretta
Orthologs
human mouse all
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Genomic context

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See ACSL1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
23
Annotation release Status Assembly Chr Location
100 current GSC_CCare_1.0 (GCF_023653815.1) 4 NC_064476.1 (72095452..72153642, complement)

Chromosome 4 - NC_064476.1Genomic Context describing neighboring genes Neighboring gene interferon regulatory factor 2 Neighboring gene caspase 3 Neighboring gene primase and DNA directed polymerase Neighboring gene centromere protein U Neighboring gene EF-hand calcium-binding domain-containing protein 6-like Neighboring gene helt bHLH transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064476.1 Chromosome 4 Reference GSC_CCare_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Caretta caretta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_CCare_1.0 Primary Assembly

Genomic

  1. NC_064476.1 Reference GSC_CCare_1.0 Primary Assembly

    Range
    72095452..72153642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048847927.1 → XP_048703884.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

  2. XM_048847928.1 → XP_048703885.1  long-chain-fatty-acid--CoA ligase 1 isoform X2

    Related
    ENSCECP00000021195.1, ENSCECT00000024596.1

  3. XM_048847929.1 → XP_048703886.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    Related
    ENSCECP00000021209.1, ENSCECT00000024611.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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