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LAMA1 laminin subunit alpha 1 [ Caretta caretta (Loggerhead turtle) ]

Gene ID: 125632329, updated on 22-Mar-2024

Summary

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Gene symbol
LAMA1
Gene description
laminin subunit alpha 1
See related
EnsemblRapid:ENSCECG00000016608
Gene type
protein coding
RefSeq status
MODEL
Organism
Caretta caretta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Caretta
Orthologs
human mouse all
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Genomic context

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See LAMA1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
65
Annotation release Status Assembly Chr Location
100 current GSC_CCare_1.0 (GCF_023653815.1) 2 NC_064474.1 (177923816..178081255)

Chromosome 2 - NC_064474.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type M Neighboring gene small nuclear ribonucleoprotein F-like Neighboring gene U2 spliceosomal RNA Neighboring gene leucine rich repeat containing 30 Neighboring gene Rho GTPase activating protein 28 Neighboring gene transmembrane protein 200C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064474.1 Chromosome 2 Reference GSC_CCare_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in blood vessel morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in camera-type eye development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Caretta caretta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_CCare_1.0 Primary Assembly

Genomic

  1. NC_064474.1 Reference GSC_CCare_1.0 Primary Assembly

    Range
    177923816..178081255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048840308.1 → XP_048696265.1  laminin subunit alpha-1 isoform X1

  2. XM_048840309.1 → XP_048696266.1  laminin subunit alpha-1 isoform X2

    Related
    ENSCECP00000024851.1, ENSCECT00000029122.1

  3. XM_048840310.1 → XP_048696267.1  laminin subunit alpha-1 isoform X3

  4. XM_048840311.1 → XP_048696268.1  laminin subunit alpha-1 isoform X4

Nucleotide Protein
Heading Accession and Version

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