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ACER3 alkaline ceramidase 3 [ Caretta caretta (Loggerhead turtle) ]

Gene ID: 125632260, updated on 18-Sep-2024

Summary

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Gene symbol
ACER3
Gene description
alkaline ceramidase 3
See related
EnsemblRapid:ENSCECG00000019237
Gene type
protein coding
RefSeq status
MODEL
Organism
Caretta caretta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Caretta
Orthologs
human mouse all
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Genomic context

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See ACER3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
100 current GSC_CCare_1.0 (GCF_023653815.1) 1 NC_064473.1 (11955821..12031203)

Chromosome 1 - NC_064473.1Genomic Context describing neighboring genes Neighboring gene tsukushi, small leucine rich proteoglycan Neighboring gene uncharacterized LOC125632282 Neighboring gene uncharacterized LOC125632275 Neighboring gene calpain 5 Neighboring gene U1 spliceosomal RNA Neighboring gene olfactory marker protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064473.1 Chromosome 1 Reference GSC_CCare_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phytosphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline ceramidase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Caretta caretta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_CCare_1.0 Primary Assembly

Genomic

  1. NC_064473.1 Reference GSC_CCare_1.0 Primary Assembly

    Range
    11955821..12031203
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048840150.1 → XP_048696107.1  alkaline ceramidase 3 isoform X1

    Related
    ENSCECP00000029196.1, ENSCECT00000033927.1

  2. XM_048840159.1 → XP_048696116.1  alkaline ceramidase 3 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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