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LOC125609185 UDP-arabinopyranose mutase 1 [ Brassica napus (rape) ]

Gene ID: 125609185, updated on 10-Oct-2024

Summary

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Gene symbol
LOC125609185
Gene description
UDP-arabinopyranose mutase 1
Locus tag
HID58_020281
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC125609185 in Genome Data Viewer
Location:
chromosome: A5
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A5 NC_063438.1 (28791045..28793146, complement)

Chromosome A5 - NC_063438.1Genomic Context describing neighboring genes Neighboring gene auxin transport protein BIG Neighboring gene rhamnogalacturonan I rhamnosyltransferase 1 Neighboring gene uncharacterized protein C9orf85 homolog Neighboring gene COBRA-like protein 1 Neighboring gene eukaryotic translation initiation factor 3 subunit M-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063438.1 Chromosome A5 Reference Da-Ae Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-arabinopyranose mutase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063438.1 Reference Da-Ae Primary Assembly

    Range
    28791045..28793146 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048780287.1 → XP_048636244.1  UDP-arabinopyranose mutase 1

    UniProtKB/TrEMBL
    A0A078J9Q1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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