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cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1255929, updated on 6-Aug-2024

Summary

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Gene symbol
cpdB
Gene description
2',3'-cyclic-nucleotide 2'-phosphodiesterase
Locus tag
STM4403
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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Genomic context

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Sequence:
NC_003197.2 (4639575..4641589, complement)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene putative reductase Neighboring gene putative transcriptional regulator Neighboring gene CysQ protein Neighboring gene putative transcriptional regulator Neighboring gene putative cytoplasmic protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

General gene information

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regulatory

  • Loc: c4641530-4641525 regulatory_class = ribosome_binding_site
  • Loc: c4641570-4641562 regulatory_class = minus_10_signal
  • Loc: c4641589-4641581 regulatory_class = minus_35_signal

General protein information

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Preferred Names
2',3'-cyclic-nucleotide 2'-phosphodiesterase
NP_463264.1
  • 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor. (SW:CN16_SALTY)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    4639575..4641589 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_463264.1 2',3'-cyclic-nucleotide 2'-phosphodiesterase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_463264.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5J0F2J6, A0A5T6KMV2, A0A5U3TA44, A0A5V2G2V8, A0A5V8XJD9, A0A5Z1ZEB0, A0A657HYJ1, A0A701AYM6, A0A723Z799, A0A744IGF8, A0A754ST80, A0A761JHA1
    Conserved Domains (1) summary
    PRK09420
    Location:1 → 647
    cpdB; bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P26265.2

Gene LinkOut

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