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LOC125587589 starch synthase 2, chloroplastic/amyloplastic-like [ Brassica napus (rape) ]

Gene ID: 125587589, updated on 10-Oct-2024

Summary

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Gene symbol
LOC125587589
Gene description
starch synthase 2, chloroplastic/amyloplastic-like
Locus tag
HID58_069126
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC125587589 in Genome Data Viewer
Location:
chromosome: C5
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C5 NC_063448.1 (56338566..56342024, complement)

Chromosome C5 - NC_063448.1Genomic Context describing neighboring genes Neighboring gene pre-rRNA-processing protein ESF1-like Neighboring gene uncharacterized protein At5g19025 Neighboring gene peroxidase 27-like Neighboring gene pyruvate, phosphate dikinase regulatory protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063448.1 Chromosome C5 Reference Da-Ae Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch synthase 2, chloroplastic/amyloplastic-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063448.1 Reference Da-Ae Primary Assembly

    Range
    56338566..56342024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048758354.1 → XP_048614311.1  starch synthase 2, chloroplastic/amyloplastic-like

    UniProtKB/TrEMBL
    A0A816JBN8
Nucleotide Protein
Heading Accession and Version

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