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yihZ D-Tyr-tRNA(Tyr) deacylase [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1255554, updated on 6-Oct-2023

Summary

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Gene symbol
yihZ
Gene description
D-Tyr-tRNA(Tyr) deacylase
Locus tag
STM4028
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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Genomic context

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Sequence:
NC_003197.2 (4238208..4238661)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene putative glycerol-3-phosphate regulon repressor Neighboring gene putative enzyme Neighboring gene tRNA processing exoribonuclease BN Neighboring gene putative acetyltransferase Neighboring gene putative cytoplasmic protein Neighboring gene putative cytoplasmic protein Neighboring gene putative acetyl esterase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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regulatory

  • Loc: 4238208-4238213 regulatory_class = ribosome_binding_site
  • Loc: 4238646-4238651 regulatory_class = ribosome_binding_site

General protein information

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Preferred Names
D-Tyr-tRNA(Tyr) deacylase
NP_462908.1
  • similar to E. coli orf, hypothetical protein (AAD13449.1); Blastp hit to AAD13449.1 (145 aa), 91% identity in aa 1 - 145

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    4238208..4238661
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_462908.1 D-Tyr-tRNA(Tyr) deacylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_462908.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5Z7Y0S7, A0A707QVP9
    Conserved Domains (1) summary
    PRK05273
    Location:1 → 145
    PRK05273; D-tyrosyl-tRNA(Tyr) deacylase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P58533.1

Gene LinkOut

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