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LOC125551530 rhamnogalacturonan I rhamnosyltransferase 4-like [ Triticum urartu ]

Gene ID: 125551530, updated on 30-Nov-2023

Summary

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Gene symbol
LOC125551530
Gene description
rhamnogalacturonan I rhamnosyltransferase 4-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Triticum urartu
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Genomic context

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See LOC125551530 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Tu2.1 (GCF_003073215.2) 4 NC_053025.1 (295543358..295546987, complement)

Chromosome 4 - NC_053025.1Genomic Context describing neighboring genes Neighboring gene chromophore lyase CRL, chloroplastic Neighboring gene uncharacterized LOC125551527 Neighboring gene guanine nucleotide exchange factor SPIKE 1 Neighboring gene probable apyrase 1 Neighboring gene endoglucanase 9-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053025.1 Chromosome 4 Reference Tu2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Separating homeologs by phasing in the tetraploid wheat transcriptome. Krasileva KV, et al. Genome Biol, 2013 Jun 25. PMID 23800085, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rhamnogalacturonan I rhamnosyltransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Triticum urartu Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tu2.1 Primary Assembly

Genomic

  1. NC_053025.1 Reference Tu2.1 Primary Assembly

    Range
    295543358..295546987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048714787.1 → XP_048570744.1  rhamnogalacturonan I rhamnosyltransferase 4-like

    UniProtKB/TrEMBL
    A0A8R7U807
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases