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LOC125546044 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like [ Triticum urartu ]

Gene ID: 125546044, updated on 10-Oct-2024

Summary

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Gene symbol
LOC125546044
Gene description
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Triticum urartu
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Genomic context

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See LOC125546044 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Tu2.1 (GCF_003073215.2) 3 NC_053024.1 (704501088..704505194)

Chromosome 3 - NC_053024.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125546043 Neighboring gene expansin-B11-like Neighboring gene probable glutathione S-transferase Neighboring gene probable glutathione S-transferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053024.1 Chromosome 3 Reference Tu2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Separating homeologs by phasing in the tetraploid wheat transcriptome. Krasileva KV, et al. Genome Biol, 2013 Jun 25. PMID 23800085, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Triticum urartu Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tu2.1 Primary Assembly

Genomic

  1. NC_053024.1 Reference Tu2.1 Primary Assembly

    Range
    704501088..704505194
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048710163.1 → XP_048566120.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like isoform X4

    UniProtKB/TrEMBL
    A0A8R7PZ68

  2. XM_048710160.1 → XP_048566117.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like isoform X1

  3. XM_048710161.1 → XP_048566118.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like isoform X2

  4. XM_048710162.1 → XP_048566119.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like isoform X3

  5. XM_048710165.1 → XP_048566122.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like isoform X5

RNA

  1. XR_007300421.1 RNA Sequence

  2. XR_007300422.1 RNA Sequence

Nucleotide Protein
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