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LOC125544575 probable beta-1,4-xylosyltransferase IRX9L [ Triticum urartu ]

Gene ID: 125544575, updated on 30-Nov-2023

Summary

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Gene symbol
LOC125544575
Gene description
probable beta-1,4-xylosyltransferase IRX9L
Gene type
protein coding
RefSeq status
MODEL
Organism
Triticum urartu
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Genomic context

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See LOC125544575 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Tu2.1 (GCF_003073215.2) 3 NC_053024.1 (496496884..496501133)

Chromosome 3 - NC_053024.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125544573 Neighboring gene auxin-responsive protein IAA5-like Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene pentatricopeptide repeat-containing protein At1g30610, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053024.1 Chromosome 3 Reference Tu2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucuronoxylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type secondary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable beta-1,4-xylosyltransferase IRX9L

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Triticum urartu Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tu2.1 Primary Assembly

Genomic

  1. NC_053024.1 Reference Tu2.1 Primary Assembly

    Range
    496496884..496501133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048708308.1 → XP_048564265.1  probable beta-1,4-xylosyltransferase IRX9L

    UniProtKB/TrEMBL
    A0A8R7TXI1
Nucleotide Protein
Heading Accession and Version

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