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LOC125511949 cellulose synthase-like protein D1 [ Triticum urartu ]

Gene ID: 125511949, updated on 10-Oct-2024

Summary

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Gene symbol
LOC125511949
Gene description
cellulose synthase-like protein D1
Gene type
protein coding
RefSeq status
MODEL
Organism
Triticum urartu
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Genomic context

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See LOC125511949 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Tu2.1 (GCF_003073215.2) 1 NC_053022.1 (354494272..354499757)

Chromosome 1 - NC_053022.1Genomic Context describing neighboring genes Neighboring gene probable methyltransferase At1g29790 Neighboring gene uncharacterized LOC125533429 Neighboring gene putative pentatricopeptide repeat-containing protein At1g16830 Neighboring gene 26S proteasome non-ATPase regulatory subunit 13 homolog B-like Neighboring gene uncharacterized LOC125512057

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053022.1 Chromosome 1 Reference Tu2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Separating homeologs by phasing in the tetraploid wheat transcriptome. Krasileva KV, et al. Genome Biol, 2013 Jun 25. PMID 23800085, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase-like protein D1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Triticum urartu Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tu2.1 Primary Assembly

Genomic

  1. NC_053022.1 Reference Tu2.1 Primary Assembly

    Range
    354494272..354499757
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048677153.1 → XP_048533110.1  cellulose synthase-like protein D1

    UniProtKB/TrEMBL
    A0A8R7P6J3
Nucleotide Protein
Heading Accession and Version

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