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speB agmatinase [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1254601, updated on 10-Oct-2024

Summary

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Gene symbol
speB
Gene description
agmatinase
Locus tag
STM3078
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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Genomic context

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Sequence:
NC_003197.2 (3239525..3240457, complement)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene transketolase 1 isozyme Neighboring gene putative Zn-dependent proteases with possible chaperone function Neighboring gene putative hydrolase or acyltransferase Neighboring gene putative mannitol dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

General gene information

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regulatory

  • Loc: c3240457-3240452 regulatory_class = ribosome_binding_site

General protein information

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Preferred Names
agmatinase
NP_461994.1
  • similar to E. coli agmatinase (AAC75974.1); Blastp hit to AAC75974.1 (306 aa), 98% identity in aa 1 - 306

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    3239525..3240457 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_461994.1 agmatinase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_461994.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3I6RV25, A0A3J8SY58, A0A3R0QAX1, A0A403MWW3, A0A5H5B2N8, A0A5T7KEB1, A0A5U0QU16, A0A5U2F0L2, A0A5W2LT51, A0A5Y4FKT3, A0A5Y7WFF9, A0A627WYT8, A0A628R665, A0A639ARC9, A0A729G255, A0A734E927, A0A735L454, A0A744AL20, A0A744H047, A0A764I1Q4
    Conserved Domains (1) summary
    PRK02190
    Location:7 → 306
    PRK02190; agmatinase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P60656.1

Gene LinkOut

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