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ygdP putative invasion protein [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1254527, updated on 6-Oct-2023

Summary

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Gene symbol
ygdP
Gene description
putative invasion protein
Locus tag
STM3004
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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Genomic context

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Sequence:
NC_003197.2 (3162174..3162715, complement)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene prepilin peptidase dependent protein B Neighboring gene prepilin peptidase dependent protein A Neighboring gene thymidylate synthetase Neighboring gene phosphatidylglycerol-prolipoprotein diacylglyceryl transferase Neighboring gene general PTS system enzyme I, transcriptional regulator with NPR and NTR proteins Neighboring gene methyl-directed mismatch repair protein Neighboring gene putative integral membrane transport protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

General gene information

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regulatory

  • Loc: c3162181-3162176 regulatory_class = ribosome_binding_site
  • Loc: c3162715-3162710 regulatory_class = ribosome_binding_site

General protein information

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Preferred Names
putative invasion protein
NP_461921.1
  • NTP pyrophosphohydrolase; similar to E. coli putative invasion protein (AAC75869.1); Blastp hit to AAC75869.1 (176 aa), 94% identity in aa 1 - 176

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    3162174..3162715 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_461921.1 putative invasion protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_461921.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3T7S5S5, A0A601LE30, A0A626ICY6, A0A714V0H1, A0A734YTL2, A0A765PDK5
    Conserved Domains (1) summary
    PRK00714
    Location:1 → 156
    PRK00714; RNA pyrophosphohydrolase; Reviewed
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P65554.1

Gene LinkOut

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