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SDC2 syndecan 2 [ Sphaerodactylus townsendi ]

Gene ID: 125438945, updated on 22-Mar-2024

Summary

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Gene symbol
SDC2
Gene description
syndecan 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Sphaerodactylus townsendi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Sphaerodactylidae; Sphaerodactylus
Orthologs
human mouse all
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Genomic context

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See SDC2 in Genome Data Viewer
Location:
chromosome: LG09
Exon count:
5
Annotation release Status Assembly LG Location
100 current MPM_Stown_v2.3 (GCF_021028975.2) LG09 NC_059433.1 (87880880..87956128, complement)

Linkage Group LG09 - NC_059433.1Genomic Context describing neighboring genes Neighboring gene metadherin Neighboring gene mitochondrial import inner membrane translocase subunit Tim23-like Neighboring gene carboxypeptidase Q Neighboring gene phosphatidylserine synthase 1 Neighboring gene mitochondrial transcription termination factor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059433.1 Chromosome LG09 Reference MPM_Stown_v2.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syndecan-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sphaerodactylus townsendi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MPM_Stown_v2.3

Genomic

  1. NC_059433.1 Reference MPM_Stown_v2.3

    Range
    87880880..87956128 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048507701.1 → XP_048363658.1  syndecan-2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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