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CHAT choline O-acetyltransferase [ Sphaerodactylus townsendi ]

Gene ID: 125438075, updated on 22-Mar-2024

Summary

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Gene symbol
CHAT
Gene description
choline O-acetyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Sphaerodactylus townsendi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Sphaerodactylidae; Sphaerodactylus
Orthologs
human mouse all
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Genomic context

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See CHAT in Genome Data Viewer
Location:
chromosome: LG08
Exon count:
16
Annotation release Status Assembly LG Location
100 current MPM_Stown_v2.3 (GCF_021028975.2) LG08 NC_059432.1 (14796539..14890331)

Linkage Group LG08 - NC_059432.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat, Ig-like and transmembrane domains 1 Neighboring gene retinal G protein coupled receptor Neighboring gene solute carrier family 18 member A3 Neighboring gene linkage group 08 C10orf53 homolog Neighboring gene uncharacterized LOC125438305

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059432.1 Chromosome LG08 Reference MPM_Stown_v2.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline O-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline O-acetyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sphaerodactylus townsendi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MPM_Stown_v2.3

Genomic

  1. NC_059432.1 Reference MPM_Stown_v2.3

    Range
    14796539..14890331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048506248.1 → XP_048362205.1  choline O-acetyltransferase isoform X1

  2. XM_048506249.1 → XP_048362206.1  choline O-acetyltransferase isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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