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LOC125436846 transforming growth factor beta-2 proprotein-like [ Sphaerodactylus townsendi ]

Gene ID: 125436846, updated on 30-Nov-2023

Summary

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Gene symbol
LOC125436846
Gene description
transforming growth factor beta-2 proprotein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Sphaerodactylus townsendi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Sphaerodactylidae; Sphaerodactylus
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Genomic context

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See LOC125436846 in Genome Data Viewer
Location:
chromosome: LG01
Exon count:
7
Annotation release Status Assembly LG Location
100 current MPM_Stown_v2.3 (GCF_021028975.2) LG01 NC_059425.1 (18816278..18825032, complement)

Linkage Group LG01 - NC_059425.1Genomic Context describing neighboring genes Neighboring gene potassium two pore domain channel subfamily K member 4 Neighboring gene uncharacterized LOC125436834 Neighboring gene 5S ribosomal RNA Neighboring gene estrogen related receptor alpha Neighboring gene tRNA methyltransferase activator subunit 11-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059425.1 Chromosome LG01 Reference MPM_Stown_v2.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables type II transforming growth factor beta receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables type III transforming growth factor beta receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SMAD protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transforming growth factor beta-2 proprotein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sphaerodactylus townsendi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MPM_Stown_v2.3

Genomic

  1. NC_059425.1 Reference MPM_Stown_v2.3

    Range
    18816278..18825032 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048504181.1 → XP_048360138.1  transforming growth factor beta-2 proprotein-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases