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wcaC putative glycosyl transferase [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1253634, updated on 6-Aug-2024

Summary

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Gene symbol
wcaC
Gene description
putative glycosyl transferase
Locus tag
STM2113
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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Genomic context

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Sequence:
NC_003197.2 (2196264..2197492, complement)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene putative acyltransferase Neighboring gene putative transferase Neighboring gene putative colanic acid polymerase Neighboring gene putative acyl transferase Neighboring gene putative glycosyl transferase Neighboring gene putative tyrosine-protein kinase Neighboring gene putative protein-tyrosine-phosphatase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

General gene information

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regulatory

  • Loc: c2196296-2196291 regulatory_class = ribosome_binding_site
  • Loc: c2197492-2197487 regulatory_class = ribosome_binding_site

General protein information

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Preferred Names
putative glycosyl transferase
NP_461058.1
  • in colanic acid gene cluster; similar to E. coli putative glycosyl transferase (AAC75118.1); Blastp hit to AAC75118.1 (405 aa), 80% identity in aa 1 - 405

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    2196264..2197492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_461058.1 putative glycosyl transferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_461058.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3T0B8B0, A0A3U2RVM7, A0A5V5HKF6, A0A5W8X705
    Conserved Domains (1) summary
    TIGR04015
    Location:1 → 405
    WcaC; colanic acid biosynthesis glycosyl transferase WcaC
Nucleotide Protein
Heading Accession and Version

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