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Colgalt2 collagen beta(1-O)galactosyltransferase 2 [ Perognathus longimembris pacificus (Pacific pocket mouse) ]

Gene ID: 125359300, updated on 22-Mar-2024

Summary

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Gene symbol
Colgalt2
Gene description
collagen beta(1-O)galactosyltransferase 2
See related
EnsemblRapid:ENSPLPG00005003946
Gene type
protein coding
RefSeq status
MODEL
Organism
Perognathus longimembris pacificus (sub-species: pacificus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Perognathinae; Perognathus
Orthologs
human mouse all
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Genomic context

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See Colgalt2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM2315922v1 (GCF_023159225.1) 11 NC_063171.1 (18770376..18873500)

Chromosome 11 - NC_063171.1Genomic Context describing neighboring genes Neighboring gene chromosome 11 C1orf21 homolog Neighboring gene uncharacterized LOC125360008 Neighboring gene tRNA splicing endonuclease subunit 15 Neighboring gene uncharacterized LOC125359302 Neighboring gene ral guanine nucleotide dissociation stimulator like 1 Neighboring gene uncharacterized LOC125359303

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063171.1 Chromosome 11 Reference ASM2315922v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables procollagen galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perognathus longimembris pacificus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2315922v1

Genomic

  1. NC_063171.1 Reference ASM2315922v1

    Range
    18770376..18873500
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048356968.1 → XP_048212925.1  procollagen galactosyltransferase 2

    Related
    ENSPLPP00005004544.1, ENSPLPT00005005110.1
Nucleotide Protein
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