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Extl1 exostosin like glycosyltransferase 1 [ Perognathus longimembris pacificus (Pacific pocket mouse) ]

Gene ID: 125354751, updated on 22-Mar-2024

Summary

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Gene symbol
Extl1
Gene description
exostosin like glycosyltransferase 1
See related
EnsemblRapid:ENSPLPG00005015781
Gene type
protein coding
RefSeq status
MODEL
Organism
Perognathus longimembris pacificus (sub-species: pacificus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Perognathinae; Perognathus
Orthologs
human mouse all
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Genomic context

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See Extl1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM2315922v1 (GCF_023159225.1) 7 NC_063167.1 (15827370..15839100)

Chromosome 7 - NC_063167.1Genomic Context describing neighboring genes Neighboring gene stathmin 1 Neighboring gene platelet activating factor acetylhydrolase 2 Neighboring gene solute carrier family 30 member 2 Neighboring gene tripartite motif containing 63

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063167.1 Chromosome 7 Reference ASM2315922v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perognathus longimembris pacificus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2315922v1

Genomic

  1. NC_063167.1 Reference ASM2315922v1

    Range
    15827370..15839100
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048350562.1 → XP_048206519.1  exostosin-like 1

    Related
    ENSPLPP00005018457.1, ENSPLPT00005020698.1
Nucleotide Protein
Heading Accession and Version

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