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Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [ Perognathus longimembris pacificus (Pacific pocket mouse) ]

Gene ID: 125353223, updated on 22-Mar-2024

Summary

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Gene symbol
Gbgt1
Gene description
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)
See related
EnsemblRapid:ENSPLPG00005008748
Gene type
protein coding
RefSeq status
MODEL
Organism
Perognathus longimembris pacificus (sub-species: pacificus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Perognathinae; Perognathus
Orthologs
human mouse all
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Genomic context

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See Gbgt1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM2315922v1 (GCF_023159225.1) 1 NC_063161.1 (159595562..159605929, complement)

Chromosome 1 - NC_063161.1Genomic Context describing neighboring genes Neighboring gene carboxyl ester lipase Neighboring gene ral guanine nucleotide dissociation stimulator Neighboring gene von Ebner gland protein 1-like Neighboring gene ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063161.1 Chromosome 1 Reference ASM2315922v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables globoside alpha-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perognathus longimembris pacificus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2315922v1

Genomic

  1. NC_063161.1 Reference ASM2315922v1

    Range
    159595562..159605929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048348750.1 → XP_048204707.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1

    Related
    ENSPLPP00005010214.1, ENSPLPT00005011443.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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