U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [ Perognathus longimembris pacificus (Pacific pocket mouse) ]

Gene ID: 125351931, updated on 2-May-2024

Summary

Go to the top of the page Help
Gene symbol
B3gnt5
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
See related
EnsemblRapid:ENSPLPG00005011717
Gene type
protein coding
RefSeq status
MODEL
Organism
Perognathus longimembris pacificus (sub-species: pacificus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Perognathinae; Perognathus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See B3gnt5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM2315922v1 (GCF_023159225.1) 5 NC_063165.1 (63963763..64007582, complement)

Chromosome 5 - NC_063165.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA63 Neighboring gene small nucleolar RNA SNORA81 Neighboring gene MCF.2 cell line derived transforming sequence-like 2 Neighboring gene 60S ribosomal protein L11-like Neighboring gene lysosomal associated membrane protein 3 Neighboring gene methylcrotonyl-CoA carboxylase subunit 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_063165.1 Chromosome 5 Reference ASM2315922v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Perognathus longimembris pacificus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2315922v1

Genomic

  1. NC_063165.1 Reference ASM2315922v1

    Range
    63963763..64007582 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048347034.1 → XP_048202991.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    Related
    ENSPLPP00005013718.1, ENSPLPT00005015367.1

RNA

  1. XR_007211060.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.