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uvrY putative LuxR/UhpA family response regulator [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1253468, updated on 4-Feb-2024

Summary

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Gene symbol
uvrY
Gene description
putative LuxR/UhpA family response regulator
Locus tag
STM1947
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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Genomic context

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Sequence:
NC_003197.2 (2038244..2038914, complement)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene tRNA-Gly Neighboring gene phosphatidylglycerophosphate synthetase Neighboring gene UvrC Neighboring gene putative inner membrane protein Neighboring gene putative cytoplasmic protein Neighboring gene transcriptional regulator of ftsQAZ gene cluster

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Salmonella pathogenicity island 4-mediated adhesion is coregulated with invasion genes in Salmonella enterica. Gerlach RG, et al. Infect Immun, 2007 Oct. PMID 17635868, Free PMC Article
  2. Integration of a complex regulatory cascade involving the SirA/BarA and Csr global regulatory systems that controls expression of the Salmonella SPI-1 and SPI-2 virulence regulons through HilD. Martínez LC, et al. Mol Microbiol, 2011 Jun. PMID 21518393, Free PMC Article
  3. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. SirA positively regulates expression of hilD and the SPI-1 and SPI-2 genes through activation of CsrB and CsrC expression.
    Title: Integration of a complex regulatory cascade involving the SirA/BarA and Csr global regulatory systems that controls expression of the Salmonella SPI-1 and SPI-2 virulence regulons through HilD.
  2. Both SirA and HilA functions were required for the secretion of SiiE and the SPI4-mediated adhesion.
    Title: Salmonella pathogenicity island 4-mediated adhesion is coregulated with invasion genes in Salmonella enterica.
Submit: New GeneRIF Correction

General gene information

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regulatory

  • Loc: c2038267-2038262 regulatory_class = ribosome_binding_site
  • Loc: c2038914-2038909 regulatory_class = ribosome_binding_site

General protein information

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Preferred Names
putative LuxR/UhpA family response regulator
NP_460900.1
  • similar to E. coli putative 2-component transcriptional regulator (AAC74981.1); Blastp hit to AAC74981.1 (218 aa), 96% identity in aa 1 - 218

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    2038244..2038914 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_460900.1 putative LuxR/UhpA family response regulator [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_460900.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1X8WC15, A0A5T3RAL3, A0A5T6XNI6, A0A5T9SH54, A0A5T9W6L7, A0A5V5D2N8, A0A5Y0N0Q8, A0A5Y4VXV1, A0A5Z6ACU0, A0A605LZL1, A0A6X7RTF1, A0A6X8DYQ2, A0A711CKS9, A0A715TSY3, A0A726P814, A0A727TC56, A0A729NKJ0, A0A730QZ57, A0A732RBG0, A0A747M1J1, A0A750RJG4, A0A751UN11, A0A754QSI3, A0A757VW57, A0A7D8ITQ9
    Conserved Domains (1) summary
    PRK09483
    Location:1 → 218
    PRK09483; response regulator; Provisional
Nucleotide Protein
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