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LOC125345716 inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5 [ Perognathus longimembris pacificus (Pacific pocket mouse) ]

Gene ID: 125345716, updated on 16-Nov-2023

Summary

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Gene symbol
LOC125345716
Gene description
inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Perognathus longimembris pacificus (sub-species: pacificus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Perognathinae; Perognathus
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Genomic context

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See LOC125345716 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM2315922v1 (GCF_023159225.1) 2 NC_063162.1 (151125284..151143980)

Chromosome 2 - NC_063162.1Genomic Context describing neighboring genes Neighboring gene inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5 Neighboring gene basic salivary proline-rich protein 1-like Neighboring gene basic salivary proline-rich protein 2-like Neighboring gene polypeptide N-acetylgalactosaminyltransferase 11 Neighboring gene lysine methyltransferase 2C Neighboring gene protein FAM204A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063162.1 Chromosome 2 Reference ASM2315922v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in spermatid development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perognathus longimembris pacificus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2315922v1

Genomic

  1. NC_063162.1 Reference ASM2315922v1

    Range
    151125284..151143980
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048337760.1 → XP_048193717.1  inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5

Nucleotide Protein
Heading Accession and Version

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