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otsB trehalose-6-phosphate phophatase, biosynthetic [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1253450, updated on 6-Oct-2023

Summary

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Gene symbol
otsB
Gene description
trehalose-6-phosphate phophatase, biosynthetic
Locus tag
STM1929
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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Genomic context

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Sequence:
NC_003197.2 (2024693..2025552, complement)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene regulator of flagellar biosynthesis Neighboring gene regulator of flagellar biosynthesis Neighboring gene putative cytoplasmic protein Neighboring gene putative universal stress protein Neighboring gene trehalose-6-phosphate synthase Neighboring gene pseudo Neighboring gene putative intracellular protease/amidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

General gene information

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regulatory

  • Loc: c2024732-2024727 regulatory_class = ribosome_binding_site
  • Loc: c2024856-2024848 regulatory_class = minus_10_signal
  • Loc: c2024874-2024866 regulatory_class = minus_35_signal
  • Loc: c2025508-2025503 regulatory_class = ribosome_binding_site
  • Loc: c2025533-2025525 regulatory_class = minus_10_signal
  • Loc: c2025552-2025544 regulatory_class = minus_35_signal

General protein information

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Preferred Names
trehalose-6-phosphate phophatase, biosynthetic
NP_460886.1
  • similar to E. coli trehalose-6-phosphate phophatase, biosynthetic (AAC74967.1); Blastp hit to AAC74967.1 (266 aa), 72% identity in aa 1 - 266

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    2024693..2025552 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_460886.1 trehalose-6-phosphate phophatase, biosynthetic [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_460886.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5W2VEJ4, A0A701CC72
    Conserved Domains (1) summary
    PRK10187
    Location:1 → 267
    PRK10187; trehalose-6-phosphate phosphatase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CL50.1

Gene LinkOut

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