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LOC125279678 heat shock 70 kDa protein-like [ Megalobrama amblycephala (Wuchang bream) ]

Gene ID: 125279678, updated on 30-Nov-2023

Summary

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Gene symbol
LOC125279678
Gene description
heat shock 70 kDa protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Megalobrama amblycephala
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Megalobrama
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Genomic context

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See LOC125279678 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
2
Annotation release Status Assembly LG Location
100 current ASM1881202v1 (GCF_018812025.1) LG1 NC_063044.1 (64668599..64671365, complement)

Linkage Group LG1 - NC_063044.1Genomic Context describing neighboring genes Neighboring gene coenzyme Q-binding protein COQ10 homolog, mitochondrial Neighboring gene uncharacterized LOC125279673 Neighboring gene hydroxysteroid (17-beta) dehydrogenase 1 Neighboring gene heat shock 70 kDa protein Neighboring gene heat shock 70 kDa protein Neighboring gene heat shock 70 kDa protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063044.1 Chromosome LG1 Reference ASM1881202v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heat shock protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables misfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to unfolded protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chaperone cofactor-dependent protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in blood microparticle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: heat shock 70 kDa protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megalobrama amblycephala Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1881202v1 Primary Assembly

Genomic

  1. NC_063044.1 Reference ASM1881202v1 Primary Assembly

    Range
    64668599..64671365 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048209619.1 → XP_048065576.1  LOW QUALITY PROTEIN: heat shock 70 kDa protein-like

    UniProtKB/TrEMBL
    B5B0I3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases