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zgc:112962 uncharacterized LOC125279350 [ Megalobrama amblycephala (Wuchang bream) ]

Gene ID: 125279350, updated on 22-Mar-2024

Summary

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Gene symbol
zgc:112962
Gene description
uncharacterized LOC125279350
Gene type
protein coding
RefSeq status
MODEL
Organism
Megalobrama amblycephala
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Megalobrama
Orthologs
zebrafish all
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Genomic context

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See zgc:112962 in Genome Data Viewer
Location:
chromosome: LG12
Exon count:
33
Annotation release Status Assembly LG Location
100 current ASM1881202v1 (GCF_018812025.1) LG12 NC_063055.1 (13772553..13787433, complement)

Linkage Group LG12 - NC_063055.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125280578 Neighboring gene torsin-1A-interacting protein 2 Neighboring gene aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 Neighboring gene transmembrane and coiled-coil domains 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063055.1 Chromosome LG12 Reference ASM1881202v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
immunoglobulin A1 protease autotransporter; proteoglycan 4; torsin-1A-interacting protein 1; torsin-1A-interacting protein 2; triadin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megalobrama amblycephala Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1881202v1 Primary Assembly

Genomic

  1. NC_063055.1 Reference ASM1881202v1 Primary Assembly

    Range
    13772553..13787433 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048208936.1 → XP_048064893.1  torsin-1A-interacting protein 1 isoform X42

  2. XM_048208930.1 → XP_048064887.1  torsin-1A-interacting protein 1 isoform X37

  3. XM_048208939.1 → XP_048064896.1  torsin-1A-interacting protein 1 isoform X45

  4. XM_048208909.1 → XP_048064866.1  torsin-1A-interacting protein 1 isoform X18

  5. XM_048208902.1 → XP_048064859.1  proteoglycan 4 isoform X11

  6. XM_048208900.1 → XP_048064857.1  immunoglobulin A1 protease autotransporter isoform X10

  7. XM_048208925.1 → XP_048064882.1  torsin-1A-interacting protein 1 isoform X32

  8. XM_048208917.1 → XP_048064874.1  torsin-1A-interacting protein 1 isoform X25

  9. XM_048208908.1 → XP_048064865.1  torsin-1A-interacting protein 1 isoform X17

  10. XM_048208895.1 → XP_048064852.1  proteoglycan 4 isoform X5

  11. XM_048208938.1 → XP_048064895.1  torsin-1A-interacting protein 1 isoform X44

  12. XM_048208929.1 → XP_048064886.1  torsin-1A-interacting protein 1 isoform X36

  13. XM_048208907.1 → XP_048064864.1  torsin-1A-interacting protein 1 isoform X16

  14. XM_048208904.1 → XP_048064861.1  immunoglobulin A1 protease autotransporter isoform X13

  15. XM_048208919.1 → XP_048064876.1  torsin-1A-interacting protein 1 isoform X27

  16. XM_048208893.1 → XP_048064850.1  proteoglycan 4 isoform X3

  17. XM_048208920.1 → XP_048064877.1  torsin-1A-interacting protein 1 isoform X28

  18. XM_048208933.1 → XP_048064890.1  torsin-1A-interacting protein 1 isoform X40

  19. XM_048208915.1 → XP_048064872.1  torsin-1A-interacting protein 1 isoform X23

  20. XM_048208935.1 → XP_048064892.1  torsin-1A-interacting protein 1 isoform X41

  21. XM_048208892.1 → XP_048064849.1  proteoglycan 4 isoform X2

  22. XM_048208905.1 → XP_048064862.1  torsin-1A-interacting protein 1 isoform X14

  23. XM_048208943.1 → XP_048064900.1  torsin-1A-interacting protein 2 isoform X49

  24. XM_048208941.1 → XP_048064898.1  torsin-1A-interacting protein 1 isoform X47

  25. XM_048208932.1 → XP_048064889.1  torsin-1A-interacting protein 1 isoform X39

  26. XM_048208940.1 → XP_048064897.1  torsin-1A-interacting protein 1 isoform X46

  27. XM_048208927.1 → XP_048064884.1  torsin-1A-interacting protein 1 isoform X34

  28. XM_048208913.1 → XP_048064870.1  torsin-1A-interacting protein 1 isoform X21

  29. XM_048208898.1 → XP_048064855.1  proteoglycan 4 isoform X8

  30. XM_048208924.1 → XP_048064881.1  torsin-1A-interacting protein 1 isoform X31

  31. XM_048208918.1 → XP_048064875.1  torsin-1A-interacting protein 1 isoform X26

  32. XM_048208928.1 → XP_048064885.1  torsin-1A-interacting protein 2 isoform X35

  33. XM_048208911.1 → XP_048064868.1  torsin-1A-interacting protein 1 isoform X20

  34. XM_048208903.1 → XP_048064860.1  torsin-1A-interacting protein 1 isoform X12

  35. XM_048208926.1 → XP_048064883.1  torsin-1A-interacting protein 1 isoform X33

  36. XM_048208916.1 → XP_048064873.1  torsin-1A-interacting protein 1 isoform X24

  37. XM_048208910.1 → XP_048064867.1  torsin-1A-interacting protein 1 isoform X19

  38. XM_048208896.1 → XP_048064853.1  torsin-1A-interacting protein 1 isoform X6

  39. XM_048208937.1 → XP_048064894.1  torsin-1A-interacting protein 1 isoform X43

  40. XM_048208931.1 → XP_048064888.1  torsin-1A-interacting protein 1 isoform X38

  41. XM_048208942.1 → XP_048064899.1  torsin-1A-interacting protein 1 isoform X48

  42. XM_048208899.1 → XP_048064856.1  triadin isoform X9

  43. XM_048208922.1 → XP_048064879.1  torsin-1A-interacting protein 1 isoform X30

  44. XM_048208906.1 → XP_048064863.1  torsin-1A-interacting protein 1 isoform X15

  45. XM_048208897.1 → XP_048064854.1  proteoglycan 4 isoform X7

  46. XM_048208914.1 → XP_048064871.1  torsin-1A-interacting protein 1 isoform X22

  47. XM_048208894.1 → XP_048064851.1  torsin-1A-interacting protein 1 isoform X4

  48. XM_048208921.1 → XP_048064878.1  proteoglycan 4 isoform X29

  49. XM_048208889.1 → XP_048064846.1  proteoglycan 4 isoform X1

  50. XM_048208891.1 → XP_048064848.1  proteoglycan 4 isoform X1

Nucleotide Protein
Heading Accession and Version

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