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efna1a ephrin-A1a [ Megalobrama amblycephala (Wuchang bream) ]

Gene ID: 125275525, updated on 22-Mar-2024

Summary

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Gene symbol
efna1a
Gene description
ephrin-A1a
See related
EnsemblRapid:ENSMAYG00005022374
Gene type
protein coding
RefSeq status
MODEL
Organism
Megalobrama amblycephala
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Megalobrama
Orthologs
zebrafish all
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Genomic context

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See efna1a in Genome Data Viewer
Location:
chromosome: LG9
Exon count:
6
Annotation release Status Assembly LG Location
100 current ASM1881202v1 (GCF_018812025.1) LG9 NC_063052.1 (28923696..28938936)

Linkage Group LG9 - NC_063052.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125275521 Neighboring gene ephrin-A3a Neighboring gene uncharacterized LOC125275524 Neighboring gene dolichyl-phosphate mannosyltransferase subunit 3, regulatory Neighboring gene tripartite motif containing 46b Neighboring gene S100 calcium binding protein A10a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063052.1 Chromosome LG9 Reference ASM1881202v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ephrin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ephrin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ephrin-A1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megalobrama amblycephala Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1881202v1 Primary Assembly

Genomic

  1. NC_063052.1 Reference ASM1881202v1 Primary Assembly

    Range
    28923696..28938936
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048202541.1 → XP_048058498.1  ephrin-A1a isoform X1

    Related
    ENSMAYP00005052595.1, ENSMAYT00005057070.1

  2. XM_048202542.1 → XP_048058499.1  ephrin-A1a isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases