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LOC125273283 glial cell line-derived neurotrophic factor [ Megalobrama amblycephala (Wuchang bream) ]

Gene ID: 125273283, updated on 22-Mar-2024

Summary

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Gene symbol
LOC125273283
Gene description
glial cell line-derived neurotrophic factor
See related
EnsemblRapid:ENSMAYG00005018238
Gene type
protein coding
RefSeq status
MODEL
Organism
Megalobrama amblycephala
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Megalobrama
Orthologs
human zebrafish all
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Genomic context

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See LOC125273283 in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
4
Annotation release Status Assembly LG Location
100 current ASM1881202v1 (GCF_018812025.1) LG8 NC_063051.1 (24895737..24918556)

Linkage Group LG8 - NC_063051.1Genomic Context describing neighboring genes Neighboring gene lysine (K)-specific demethylase 4A, genome duplicate a Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 3a Neighboring gene RAD54 like Neighboring gene leucine rich repeat containing 41 Neighboring gene ubiquinol-cytochrome c reductase hinge protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063051.1 Chromosome LG8 Reference ASM1881202v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glial cell-derived neurotrophic factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glial cell line-derived neurotrophic factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megalobrama amblycephala Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1881202v1 Primary Assembly

Genomic

  1. NC_063051.1 Reference ASM1881202v1 Primary Assembly

    Range
    24895737..24918556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048198482.1 → XP_048054439.1  glial cell line-derived neurotrophic factor

    Related
    ENSMAYP00005041868.1, ENSMAYT00005045329.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases