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map3k20a mitogen-activated protein kinase kinase kinase 20a [ Megalobrama amblycephala (Wuchang bream) ]

Gene ID: 125269809, updated on 22-Mar-2024

Summary

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Gene symbol
map3k20a
Gene description
mitogen-activated protein kinase kinase kinase 20a
See related
EnsemblRapid:ENSMAYG00005021103
Gene type
protein coding
RefSeq status
MODEL
Organism
Megalobrama amblycephala
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Megalobrama
Orthologs
human zebrafish all
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Genomic context

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See map3k20a in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
21
Annotation release Status Assembly LG Location
100 current ASM1881202v1 (GCF_018812025.1) LG6 NC_063049.1 (7704584..7762750)

Linkage Group LG6 - NC_063049.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125269481 Neighboring gene Rap guanine nucleotide exchange factor 4a Neighboring gene uncharacterized LOC125269811 Neighboring gene cell division cycle associated 7a Neighboring gene sp3a transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063049.1 Chromosome LG6 Reference ASM1881202v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitogen-activated protein kinase kinase kinase 20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megalobrama amblycephala Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1881202v1 Primary Assembly

Genomic

  1. NC_063049.1 Reference ASM1881202v1 Primary Assembly

    Range
    7704584..7762750
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048192794.1 → XP_048048751.1  mitogen-activated protein kinase kinase kinase 20 isoform X1

    Related
    ENSMAYP00005049438.1, ENSMAYT00005053599.1

  2. XM_048192797.1 → XP_048048754.1  mitogen-activated protein kinase kinase kinase 20 isoform X3

    Related
    ENSMAYP00005049414.1, ENSMAYT00005053575.1

  3. XM_048192796.1 → XP_048048753.1  mitogen-activated protein kinase kinase kinase 20 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases