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sfrp1a secreted frizzled-related protein 1a [ Megalobrama amblycephala (Wuchang bream) ]

Gene ID: 125266511, updated on 22-Mar-2024

Summary

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Gene symbol
sfrp1a
Gene description
secreted frizzled-related protein 1a
See related
EnsemblRapid:ENSMAYG00005023495
Gene type
protein coding
RefSeq status
MODEL
Organism
Megalobrama amblycephala
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Megalobrama
Orthologs
zebrafish all
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Genomic context

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See sfrp1a in Genome Data Viewer
Location:
chromosome: LG4
Exon count:
4
Annotation release Status Assembly LG Location
100 current ASM1881202v1 (GCF_018812025.1) LG4 NC_063047.1 (8691168..8701982)

Linkage Group LG4 - NC_063047.1Genomic Context describing neighboring genes Neighboring gene lysyl oxidase-like 2b Neighboring gene dopamine receptor D7 Neighboring gene zinc finger, matrin-type 4a Neighboring gene transcriptional and immune response regulator a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063047.1 Chromosome LG4 Reference ASM1881202v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secreted frizzled-related protein 1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megalobrama amblycephala Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1881202v1 Primary Assembly

Genomic

  1. NC_063047.1 Reference ASM1881202v1 Primary Assembly

    Range
    8691168..8701982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048187257.1 → XP_048043214.1  secreted frizzled-related protein 1a isoform X2

  2. XM_048187256.1 → XP_048043213.1  secreted frizzled-related protein 1a isoform X1

    Related
    ENSMAYP00005055103.1, ENSMAYT00005059917.1

RNA

  1. XR_007184502.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases