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ptpn5 protein tyrosine phosphatase non-receptor type 5 [ Megalobrama amblycephala (Wuchang bream) ]

Gene ID: 125264984, updated on 22-Mar-2024

Summary

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Gene symbol
ptpn5
Gene description
protein tyrosine phosphatase non-receptor type 5
See related
EnsemblRapid:ENSMAYG00005028755
Gene type
protein coding
RefSeq status
MODEL
Organism
Megalobrama amblycephala
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Megalobrama
Orthologs
human zebrafish all
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Genomic context

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See ptpn5 in Genome Data Viewer
Location:
chromosome: LG3
Exon count:
15
Annotation release Status Assembly LG Location
100 current ASM1881202v1 (GCF_018812025.1) LG3 NC_063046.1 (28363574..28383167, complement)

Linkage Group LG3 - NC_063046.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family, member 14 Neighboring gene KIAA0232 ortholog Neighboring gene receptor-type tyrosine-protein phosphatase eta-like Neighboring gene protein enabled homolog Neighboring gene protein tyrosine phosphatase receptor type Ja

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063046.1 Chromosome LG3 Reference ASM1881202v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein phosphatase non-receptor type 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megalobrama amblycephala Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1881202v1 Primary Assembly

Genomic

  1. NC_063046.1 Reference ASM1881202v1 Primary Assembly

    Range
    28363574..28383167 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048184835.1 → XP_048040792.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

    Related
    ENSMAYP00005067427.1, ENSMAYT00005074169.1

  2. XM_048184833.1 → XP_048040790.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

  3. XM_048184834.1 → XP_048040791.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

    Related
    ENSMAYP00005067422.1, ENSMAYT00005074164.1

  4. XM_048184837.1 → XP_048040794.1  tyrosine-protein phosphatase non-receptor type 5 isoform X2

    Related
    ENSMAYP00005067417.1, ENSMAYT00005074159.1

  5. XM_048184838.1 → XP_048040795.1  tyrosine-protein phosphatase non-receptor type 5 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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