U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cacna1bb calcium channel, voltage-dependent, N type, alpha 1B subunit, b [ Megalobrama amblycephala (Wuchang bream) ]

Gene ID: 125252855, updated on 22-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
cacna1bb
Gene description
calcium channel, voltage-dependent, N type, alpha 1B subunit, b
See related
EnsemblRapid:ENSMAYG00005036739
Gene type
protein coding
RefSeq status
MODEL
Organism
Megalobrama amblycephala
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Megalobrama
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See cacna1bb in Genome Data Viewer
Location:
chromosome: LG18
Exon count:
50
Annotation release Status Assembly LG Location
100 current ASM1881202v1 (GCF_018812025.1) LG18 NC_063061.1 (20097718..20275975, complement)

Linkage Group LG18 - NC_063061.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(I) chain Neighboring gene mannosidase, alpha, class 1B, member 1a Neighboring gene GTPase IMAP family member 8 Neighboring gene euchromatic histone-lysine N-methyltransferase 1b Neighboring gene arrestin domain containing 1b

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_063061.1 Chromosome LG18 Reference ASM1881202v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
voltage-dependent N-type calcium channel subunit alpha-1B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Megalobrama amblycephala Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1881202v1 Primary Assembly

Genomic

  1. NC_063061.1 Reference ASM1881202v1 Primary Assembly

    Range
    20097718..20275975 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048166481.1 → XP_048022438.1  voltage-dependent N-type calcium channel subunit alpha-1B isoform X10

    Related
    ENSMAYP00005081358.1, ENSMAYT00005095466.1

  2. XM_048166478.1 → XP_048022435.1  voltage-dependent N-type calcium channel subunit alpha-1B isoform X7

  3. XM_048166473.1 → XP_048022430.1  voltage-dependent N-type calcium channel subunit alpha-1B isoform X4

  4. XM_048166480.1 → XP_048022437.1  voltage-dependent N-type calcium channel subunit alpha-1B isoform X9

  5. XM_048166475.1 → XP_048022432.1  voltage-dependent N-type calcium channel subunit alpha-1B isoform X6

  6. XM_048166479.1 → XP_048022436.1  voltage-dependent N-type calcium channel subunit alpha-1B isoform X8

  7. XM_048166472.1 → XP_048022429.1  voltage-dependent N-type calcium channel subunit alpha-1B isoform X3

    Related
    ENSMAYP00005081333.1, ENSMAYT00005095381.1

  8. XM_048166474.1 → XP_048022431.1  voltage-dependent N-type calcium channel subunit alpha-1B isoform X5

    Related
    ENSMAYP00005081376.1, ENSMAYT00005095522.1

  9. XM_048166471.1 → XP_048022428.1  voltage-dependent N-type calcium channel subunit alpha-1B isoform X2

  10. XM_048166470.1 → XP_048022427.1  voltage-dependent N-type calcium channel subunit alpha-1B isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases