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dnajb6a DnaJ heat shock protein family (Hsp40) member B6a [ Megalobrama amblycephala (Wuchang bream) ]

Gene ID: 125250611, updated on 22-Mar-2024

Summary

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Gene symbol
dnajb6a
Gene description
DnaJ heat shock protein family (Hsp40) member B6a
See related
EnsemblRapid:ENSMAYG00005024504
Gene type
protein coding
RefSeq status
MODEL
Organism
Megalobrama amblycephala
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Megalobrama
Orthologs
zebrafish all
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Genomic context

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See dnajb6a in Genome Data Viewer
Location:
chromosome: LG17
Exon count:
10
Annotation release Status Assembly LG Location
100 current ASM1881202v1 (GCF_018812025.1) LG17 NC_063060.1 (34477264..34486789)

Linkage Group LG17 - NC_063060.1Genomic Context describing neighboring genes Neighboring gene sonic hedgehog signaling molecule b Neighboring gene uncharacterized LOC125251816 Neighboring gene transient receptor potential cation channel, subfamily A, member 1a Neighboring gene potassium voltage-gated channel subfamily B member 2a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063060.1 Chromosome LG17 Reference ASM1881202v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megalobrama amblycephala Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1881202v1 Primary Assembly

Genomic

  1. NC_063060.1 Reference ASM1881202v1 Primary Assembly

    Range
    34477264..34486789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048163277.1 → XP_048019234.1  dnaJ homolog subfamily B member 6a isoform X1

  2. XM_048163276.1 → XP_048019233.1  dnaJ homolog subfamily B member 6a isoform X1

    Related
    ENSMAYP00005057872.1, ENSMAYT00005062828.1

  3. XM_048163278.1 → XP_048019235.1  dnaJ homolog subfamily B member 6a isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases