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cacna1c calcium channel, voltage-dependent, L type, alpha 1C subunit [ Megalobrama amblycephala (Wuchang bream) ]

Gene ID: 125245652, updated on 22-Mar-2024

Summary

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Gene symbol
cacna1c
Gene description
calcium channel, voltage-dependent, L type, alpha 1C subunit
See related
EnsemblRapid:ENSMAYG00005035030
Gene type
protein coding
RefSeq status
MODEL
Organism
Megalobrama amblycephala
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Megalobrama
Orthologs
human zebrafish all
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Genomic context

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See cacna1c in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
52
Annotation release Status Assembly LG Location
100 current ASM1881202v1 (GCF_018812025.1) LG14 NC_063057.1 (17538223..17726149)

Linkage Group LG14 - NC_063057.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 146 Neighboring gene gamma-secretase activating protein Neighboring gene serine/threonine kinase 38 like Neighboring gene calcium channel, voltage-dependent, alpha 2/delta subunit 4a Neighboring gene leucine-rich repeats and transmembrane domains 2a Neighboring gene decapping mRNA 1B Neighboring gene uncharacterized LOC125245669 Neighboring gene myelin-associated glycoprotein-like Neighboring gene N-acyl phosphatidylethanolamine phospholipase D

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063057.1 Chromosome LG14 Reference ASM1881202v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-dependent L-type calcium channel subunit alpha-1C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megalobrama amblycephala Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1881202v1 Primary Assembly

Genomic

  1. NC_063057.1 Reference ASM1881202v1 Primary Assembly

    Range
    17538223..17726149
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048156334.1 → XP_048012291.1  voltage-dependent L-type calcium channel subunit alpha-1C isoform X12

    Related
    ENSMAYP00005078614.1, ENSMAYT00005090114.1

  2. XM_048156335.1 → XP_048012292.1  voltage-dependent L-type calcium channel subunit alpha-1C isoform X12

  3. XM_048156325.1 → XP_048012282.1  voltage-dependent L-type calcium channel subunit alpha-1C isoform X4

  4. XM_048156328.1 → XP_048012285.1  voltage-dependent L-type calcium channel subunit alpha-1C isoform X7

  5. XM_048156324.1 → XP_048012281.1  voltage-dependent L-type calcium channel subunit alpha-1C isoform X3

  6. XM_048156322.1 → XP_048012279.1  voltage-dependent L-type calcium channel subunit alpha-1C isoform X1

  7. XM_048156329.1 → XP_048012286.1  voltage-dependent L-type calcium channel subunit alpha-1C isoform X8

  8. XM_048156332.1 → XP_048012289.1  voltage-dependent L-type calcium channel subunit alpha-1C isoform X11

  9. XM_048156327.1 → XP_048012284.1  voltage-dependent L-type calcium channel subunit alpha-1C isoform X6

  10. XM_048156323.1 → XP_048012280.1  voltage-dependent L-type calcium channel subunit alpha-1C isoform X2

    Related
    ENSMAYP00005078603.1, ENSMAYT00005090103.1

  11. XM_048156326.1 → XP_048012283.1  voltage-dependent L-type calcium channel subunit alpha-1C isoform X5

  12. XM_048156330.1 → XP_048012287.1  voltage-dependent L-type calcium channel subunit alpha-1C isoform X9

  13. XM_048156331.1 → XP_048012288.1  voltage-dependent L-type calcium channel subunit alpha-1C isoform X10

    Related
    ENSMAYP00005078597.1, ENSMAYT00005090097.1
Nucleotide Protein
Heading Accession and Version

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