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vegfab vascular endothelial growth factor Ab [ Megalobrama amblycephala (Wuchang bream) ]

Gene ID: 125244347, updated on 22-Mar-2024

Summary

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Gene symbol
vegfab
Gene description
vascular endothelial growth factor Ab
See related
EnsemblRapid:ENSMAYG00005012603
Gene type
protein coding
RefSeq status
MODEL
Organism
Megalobrama amblycephala
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Megalobrama
Orthologs
zebrafish all
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Genomic context

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See vegfab in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
8
Annotation release Status Assembly LG Location
100 current ASM1881202v1 (GCF_018812025.1) LG14 NC_063057.1 (3000878..3012154)

Linkage Group LG14 - NC_063057.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S18A Neighboring gene uncharacterized LOC125244348 Neighboring gene uncharacterized LOC125246264 Neighboring gene hemagglutinin/amebocyte aggregation factor-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_063057.1 Chromosome LG14 Reference ASM1881202v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemoattractant activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables vascular endothelial growth factor receptor 1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in induction of positive chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of endothelial cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of mast cell chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vascular endothelial growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vascular endothelial growth factor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vascular endothelial growth factor Ab

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megalobrama amblycephala Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1881202v1 Primary Assembly

Genomic

  1. NC_063057.1 Reference ASM1881202v1 Primary Assembly

    Range
    3000878..3012154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048154429.1 → XP_048010386.1  vascular endothelial growth factor Ab isoform X2

  2. XM_048154428.1 → XP_048010385.1  vascular endothelial growth factor Ab isoform X1

    Related
    ENSMAYP00005027035.1, ENSMAYT00005029841.1

  3. XM_048154431.1 → XP_048010388.1  vascular endothelial growth factor Ab isoform X4

    Related
    ENSMAYP00005027026.1, ENSMAYT00005029831.1

  4. XM_048154430.1 → XP_048010387.1  vascular endothelial growth factor Ab isoform X3

    Related
    ENSMAYP00005027042.1, ENSMAYT00005029848.1
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases