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LOC125240371 tRNA pseudouridine(38/39) synthase [ Leguminivora glycinivorella ]

Gene ID: 125240371, updated on 10-May-2024

Summary

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Gene symbol
LOC125240371
Gene description
tRNA pseudouridine(38/39) synthase
See related
EnsemblRapid:ENSLGLG00000010587
Gene type
protein coding
RefSeq status
MODEL
Organism
Leguminivora glycinivorella
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Tortricoidea; Tortricidae; Olethreutinae; Grapholitini; Leguminivora
Orthologs
fruit fly all
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Genomic context

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See LOC125240371 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
10
Annotation release Status Assembly Chr Location
100 current LegGlyc_1.1 (GCF_023078275.1) 27 NC_062997.1 (2501139..2516570)

Chromosome 27 - NC_062997.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125240366 Neighboring gene putative nuclease HARBI1 Neighboring gene uncharacterized LOC125240367 Neighboring gene Krueppel-like factor 3 Neighboring gene CUE domain-containing protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062997.1 Chromosome 27 Reference LegGlyc_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pseudouridine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: tRNA pseudouridine(38/39) synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leguminivora glycinivorella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LegGlyc_1.1

Genomic

  1. NC_062997.1 Reference LegGlyc_1.1

    Range
    2501139..2516570
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048148279.1 → XP_048004236.1  LOW QUALITY PROTEIN: tRNA pseudouridine(38/39) synthase

    Related
    ENSLGLP00000013053.1, ENSLGLT00000017316.1
Nucleotide Protein
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