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ompX outer membrane protease, receptor for phage OX2 [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1252352, updated on 6-Oct-2023

Summary

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Gene symbol
ompX
Gene description
outer membrane protease, receptor for phage OX2
Locus tag
STM0833
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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Genomic context

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Sequence:
NC_003197.2 (899528..900052)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene stress response DNA-binding protein; starvation induced resistance to H2O2 Neighboring gene putative permease Neighboring gene putative integral membrane protein Neighboring gene putative Mn-dependent transcriptional regulator Neighboring gene putative di- and tricarboxylate transporters

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic regulation of the ompX porin of Salmonella Typhimurium in response to hydrogen peroxide stress. Briones AC, et al. Biol Res, 2022 Feb 22. PMID 35193678, Free PMC Article
  2. Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis. Papenfort K, et al. Mol Microbiol, 2008 May. PMID 18399940
  3. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Genetic regulation of the ompX porin of Salmonella Typhimurium in response to hydrogen peroxide stress.
    Title: Genetic regulation of the ompX porin of Salmonella Typhimurium in response to hydrogen peroxide stress.
  2. CyaR (formerly RyeE) sRNA as an ompX repressor was identified.(CyaR)
    Title: Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis.
Submit: New GeneRIF Correction

General gene information

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regulatory

  • Loc: 899528-899533 regulatory_class = ribosome_binding_site

General protein information

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Preferred Names
outer membrane protease, receptor for phage OX2
NP_459810.1
  • similar to E. coli outer membrane protein X (AAC73901.1); Blastp hit to AAC73901.1 (171 aa), 91% identity in aa 1 - 171

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    899528..900052
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_459810.1 outer membrane protease, receptor for phage OX2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_459810.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5U0DHQ7, A0A5U7UZT4, A0A5V0B874, A0A605QQI7, A0A710KH40, A0A738AWM5, A0A738DWC8, A0A747NEL1, A0A749BQ53, A0A750HXJ5, A0A754E0P6
    Conserved Domains (1) summary
    PRK09408
    Location:1 → 171
    ompX; outer membrane protein OmpX
Nucleotide Protein
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Research Materials