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Trm1 tRNA methyltransferase 1 [ Leguminivora glycinivorella ]

Gene ID: 125233781, updated on 23-May-2024

Summary

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Gene symbol
Trm1
Gene description
tRNA methyltransferase 1
See related
EnsemblRapid:ENSLGLG00000016559
Gene type
protein coding
RefSeq status
MODEL
Organism
Leguminivora glycinivorella
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Tortricoidea; Tortricidae; Olethreutinae; Grapholitini; Leguminivora
Orthologs
fruit fly all
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Genomic context

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See Trm1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
10
Annotation release Status Assembly Chr Location
100 current LegGlyc_1.1 (GCF_023078275.1) 15 NC_062985.1 (1436607..1448874, complement)

Chromosome 15 - NC_062985.1Genomic Context describing neighboring genes Neighboring gene glycosylated lysosomal membrane protein A-like Neighboring gene uncharacterized LOC125233917 Neighboring gene nuclear cap-binding protein subunit 1-like Neighboring gene mucin-5AC-like Neighboring gene decapping protein 2 Neighboring gene beta-ureidopropionase-like Neighboring gene fructose-1,6-bisphosphatase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062985.1 Chromosome 15 Reference LegGlyc_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA N2-guanine methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: probable tRNA (guanine(26)-N(2))-dimethyltransferase
Names
probable tRNA (guanine(26)-N(2))-dimethyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leguminivora glycinivorella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LegGlyc_1.1

Genomic

  1. NC_062985.1 Reference LegGlyc_1.1

    Range
    1436607..1448874 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048139876.1 → XP_047995833.1  LOW QUALITY PROTEIN: probable tRNA (guanine(26)-N(2))-dimethyltransferase

    Related
    ENSLGLP00000020168.1, ENSLGLT00000026921.1
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases