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LOC125229198 delta-sarcoglycan-like [ Leguminivora glycinivorella ]

Gene ID: 125229198, updated on 30-Nov-2023

Summary

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Gene symbol
LOC125229198
Gene description
delta-sarcoglycan-like
See related
EnsemblRapid:ENSLGLG00000017530
Gene type
protein coding
RefSeq status
MODEL
Organism
Leguminivora glycinivorella
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Tortricoidea; Tortricidae; Olethreutinae; Grapholitini; Leguminivora
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Genomic context

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See LOC125229198 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
100 current LegGlyc_1.1 (GCF_023078275.1) 8 NC_062978.1 (8141475..8149470, complement)

Chromosome 8 - NC_062978.1Genomic Context describing neighboring genes Neighboring gene ER membrane protein complex subunit 10 Neighboring gene uncharacterized oxidoreductase YrbE-like Neighboring gene uncharacterized LOC125228684 Neighboring gene zeta-sarcoglycan-like Neighboring gene uncharacterized LOC125228685

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062978.1 Chromosome 8 Reference LegGlyc_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leguminivora glycinivorella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LegGlyc_1.1

Genomic

  1. NC_062978.1 Reference LegGlyc_1.1

    Range
    8141475..8149470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048133992.1 → XP_047989949.1  delta-sarcoglycan-like

    Related
    ENSLGLP00000021492.1, ENSLGLT00000028534.1
Nucleotide Protein
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