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nei endonuclease VIII [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1252248, updated on 6-Oct-2023

Summary

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Gene symbol
nei
Gene description
endonuclease VIII
Locus tag
STM0728
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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Genomic context

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Sequence:
NC_003197.2 (793916..794719)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene putative glycosyl transferase Neighboring gene putative cytoplasmic protein Neighboring gene putative transport protein Neighboring gene citrate synthase Neighboring gene putative inner membrane protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

General gene information

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regulatory

  • Loc: 793916-793921 regulatory_class = ribosome_binding_site

General protein information

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Preferred Names
endonuclease VIII
NP_459713.1
  • removes oxidized pyrimidines; may also remove oxidized purines in absence of MutY and Fpg; similar to E. coli endonuclease VIII and DNA N-glycosylase with an AP lyase activity (AAC73808.1); Blastp hit to AAC73808.1 (263 aa), 88% identity in aa 1 - 262

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    793916..794719
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_459713.1 endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_459713.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5T3IFU9, A0A5U0FHA4, A0A603KIX4, A0A728IKT2
    Conserved Domains (1) summary
    PRK10445
    Location:1 → 263
    PRK10445; endonuclease VIII; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CL05.1

Gene LinkOut

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